Indian Council of Agricultural Research
(Agricultural Knowledge Management Information System)


ICAR-Central Potato Research Institute, Shimla-171001, Himachal Pradesh (http://cpri.icar.gov.in)
Click Here to See Management Committee
Instrument Details
Instrument/Facility Name: NimbleGen MS 200 Microarray Scanner
Make                                   : Tecan Austria GmbH
Model                                  : NimbleGen MS 200 [Roche]
Specification   :

Click to ViewPixel resolution: 2 μm, 5 μm, 10 μm, 20 μm, 40 μm Dynamic range: 105 (16-bit data format) Recommended dyes: Cy3 and Cy5 (also compatible: Alexa 555 and Alexa 647 or DY 547 and DY 647) Limit of detection: 0.0025 Cy3; 0.005 Cy5 (chromophores/μm2) Dynamic Autofocus: Auto-adjusts for optimal focus position and angle. Uniformity: <4% CV Light source: Two solid-state lasers (532 nm and 635 nm) Detector: Two low dark current PMT (photomultiplier tubes) Glass slides specifications: 25 x 75 mm (1 x 3 in) Ozone protection: Carbon-filtered airflow

  Working Principles
Click to View

  Applications
  User Instructions
Gene expression – NimbleGen microarrays enable accurate, sensitive, and specific interrogation of genome-wide expression for any sequenced and annotated genome. Sequence Capture – a revolutionary process for the enrichment of selected genomic regions from full complexity human genomic DNA in a single step. CGH/CNV – Comparative Genomic Hybridization (CGH) measures DNA copy number differences between a test and reference genome. ChIP-chip – Chromatin Immunoprecipitation-on-chip is a powerful tool to map chromatin structure and DNA binding sites of transcription factors and polymerases. DNA Methylation – NimbleGen provides the most sensitive and specific DNA Methylation microarrays on the market. CGS – Comparative Genome Sequencing (CGS) rapidly surveys entire microbial genomes, identifying SNPs, insertions, or deletions and then fully characterizing them by array sequencing with unrivaled speed and accuracy.

  Contact Us
Contact No. 0177-2625073
Email Id director.cpri@icar.gov.in

  NimbleGen MS 200 Microarray Scanner Charges
Procedure Name
Industry
University
National LAB/R&D
Remark
functional genomics
1,50,000
80,000
80,000
Per sample

Additional Rs 100/-towards postal charges if result are to be posted
The Demand Draft should be in favour of "ICAR- Unit CPRI Shimla"
Letter, DD & Samples send to "The Director, ICAR-CPRI Shimla"